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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849043.1_cds_XP_016510654.1_23469
CDS Infomation

[gene=LOC107827933] [db_xref=GeneID:107827933] [protein=homeobox-leucine zipper protein HDG2-like] [protein_id=XP_016510654.1] [location=join(73824..73925,74991..75205,75394..75511,76246..76437,77050..77484,78167..78268,78386..78586,78829..79009,79086..79360,79601..79696,80215..80574)] [gbkey=CDS]
Sequence

ATGCCGTCCAGAATTTCTCGTCGGTCTAACAAGATGTCATCGTTGGTCGTAAATGATGGA
ATTGATATTGGATTTTCTTCTTCTGGGCTTCCACTTGGACAGTCTAGTAGCATGCTGGAC
AGTCAGCTCCATTCACTGGACATGTTATCAAATACATCAGAAAGTGAAATGCCAAGACTG
AGTAGTGAAGATTTTGGAAGCAAATCTGGTAATGAAGGCAATTCTGCTGGTGATGAACAA
GATGTCAATAATAAGAGCCTCAATAAGCGAAAGCGTTATCACCGCCATACTCAGCATCAG
ATCCAAGAATTGGAAGCATATTTTAAGGAATGCCCTCACCCAGATGACAAGCAAAGGAAA
GAGCTAAGCCGAGAATTAGGGTTAGAGCCTTTGCAAATCAAATTTTGGTTCCAAAATAAG
CGTACTCAGATGAAGACTAAAAATGAGCGCGGTGAAAACTCACACCTTCGAGCAGAAAAT
GAAAAGCTTAGGGCAGAAAATCTGCGATTCAGAGAAGCTCTGGGCAATGTCTCCTGCCCT
AATTGTGGTGGCCAACAACCCCCTATTGGCGAAATGTCATATGATGAACATCAATTAAGA
TTGGAAAACACTCGACTTAGAGAAGAGATTGAGCGCATTTCAACTATTGCATCAAAATAT
GTGGGGAAGCCATTTTCAAACCATAACAATGGTTACTCTCCTCCGCTTGACCTCGGCGTT
CCTGCATTTTCAACGCCACAAAGTGTCAATGGAGACGCGTATGGAGATGGCGAAGATGTT
ATAATAAGTTCAATAATCGGACCGAGTGACGCTGAGAAGCCATTTATCATAGAACTTGCA
GTTGCAGCCATGGAAGAGTTTATTCAAATGGCACATATGCAAGAACCACTTTGGTTTCCT
AGCATTGAAAATGGAACAAGCTTGTTAAATGAAGAAGAGTATTTTAGGATTTTTCCAAGA
GGAATTGGACCTAAGCCTGATGGATTTAAGACTGAAGCTTCAAGGGAAACTGCTGTTGTT
ATAATGAATCATGTTAACCTTGTGGAAATTCTCATGGATGTGAATCACTGGTCAAGTATG
TTTTCTGGTGTTGTGTCGAGGGCTTCAACTATTGATGTACTATCAACTGGAGTAGCAGGT
AATTTTACTGGAGCATTGCAAGTGATATTAGCAGAATTTCAAGTACCCTCTCCCCAGGTT
CCAACTCGAGAATGCTACTTTGCTAGGTATTGCAAGCACAGAGTTGACGGTACATGGGCT
GTTGTCGACGTTTCATTGGACCATTTACGCGCTATCCCATCTGCTAGGTGCCGGAGAAGG
CCCTCAGGGTGCCTTATTCAAGAGATGCCAAATGGGTACTCAAAGGTCACATGGGTTGAA
CATATTGAAGTTGACGATAGTGCAGTCCACAATATTTACAAGCCTTTAGTGAGTTCTGGC
CTTGCCTTTGGGGCAAAGCGATGGACTGCAACTCTAGATAGGCAATGTGAACGTCTTGCA
AGTGCTATGGCCACAAATTTTCCAACCAATGACCTTAGTAACATGGTGTTGACAAATCAA
GATAGCAGAAAGAGTATGTTGAAGTTAGCAGAGAGAATGGTGAATAGCTTTTGTTCTGGA
ATGAGTGCCACGGCTGGTAATCAATGGTCGACGCTTTCTGGAAGTGGCTCCGATGATAAT
GTTCGAGTTATGACTAGGAAAAGTGTAGATGATCCTGGGAGACCACCTGGTATTGTGTTA
AGTGCTGCAACTTCATTTTGGCTGCCGATTTCTCCTAAAAGAGTATTCGACTTCCTCCGC
GATGAAAACACTAGGAGCGAGTGGGACATCCTCTCCAATGGGGGTGTTGTTCAAGAAATG
GCTCATATTGCTAATGGAAGGGAAACAGGCAATTGTGTCTCATTATTGAGAGTAAATAGT
TCAAACTCAAGCCAAAGCAATATGCTAATATTGCAAGAAAGCAGCACTGATCCAACAAAC
TCCTATGTTATCTATGCACCTGTTGATATTGGTGCAATGAACATAGTATTGGGTGGTGGA
GATCCAGATTTTGTTGCACTTTTACCCTCCGGATTCGCGATACTACCAGATGGCCCTCCA
GGAAATAGTAGAGTTGGTTCTGGTGGATCTCTACTAACTGTTGCATTTCAGATTTTGGTT
GATTCAATTCCTACTGCAAAGCTTTCACTAGGATCAGTTGCTACTGTGAACAATCTCATT
GCTTGCACTGTGGATAGGATCAAAGCTGCTCTTTTATCCGAGAGTACACCTTCTTAA

Peptide Sequence

PEP ID

XP_016510654.1
PEP Infomation

PREDICTED: homeobox-leucine zipper protein HDG2-like [Nicotiana tabacum]
Sequence

MPSRISRRSNKMSSLVVNDGIDIGFSSSGLPLGQSSSMLDSQLHSLDMLSNTSESEMPRL
SSEDFGSKSGNEGNSAGDEQDVNNKSLNKRKRYHRHTQHQIQELEAYFKECPHPDDKQRK
ELSRELGLEPLQIKFWFQNKRTQMKTKNERGENSHLRAENEKLRAENLRFREALGNVSCP
NCGGQQPPIGEMSYDEHQLRLENTRLREEIERISTIASKYVGKPFSNHNNGYSPPLDLGV
PAFSTPQSVNGDAYGDGEDVIISSIIGPSDAEKPFIIELAVAAMEEFIQMAHMQEPLWFP
SIENGTSLLNEEEYFRIFPRGIGPKPDGFKTEASRETAVVIMNHVNLVEILMDVNHWSSM
FSGVVSRASTIDVLSTGVAGNFTGALQVILAEFQVPSPQVPTRECYFARYCKHRVDGTWA
VVDVSLDHLRAIPSARCRRRPSGCLIQEMPNGYSKVTWVEHIEVDDSAVHNIYKPLVSSG
LAFGAKRWTATLDRQCERLASAMATNFPTNDLSNMVLTNQDSRKSMLKLAERMVNSFCSG
MSATAGNQWSTLSGSGSDDNVRVMTRKSVDDPGRPPGIVLSAATSFWLPISPKRVFDFLR
DENTRSEWDILSNGGVVQEMAHIANGRETGNCVSLLRVNSSNSSQSNMLILQESSTDPTN
SYVIYAPVDIGAMNIVLGGGDPDFVALLPSGFAILPDGPPGNSRVGSGGSLLTVAFQILV
DSIPTAKLSLGSVATVNNLIACTVDRIKAALLSESTPS

Transcript Sequence

Gene sequence data has not been registered.